Tuesday, May 20, 2014

bacterial infections -- keywords and MeSH

rought draft, largely based on MeSH trees.  

I'm working toward a strategy that combines several of my posts and includes all infectious agents.  I just removed some virus and fungus words that had been left in this strategy, some missing OR's and "".  Sorry for the errors.

("bacteremia"[mesh] OR "bacteria"[MeSH Terms] OR "drug resistance, bacterial"[mesh]  OR "bacterial infections"[mesh] OR bacterem* OR bacteraem* OR bacteremia OR bacteraemia OR bacteremias OR bacteraemias OR bacteremic OR bacteraemic OR exotoxem* OR endotoxem* OR endotoxemia OR endotoxemias OR endotoxemic OR endotoxaem* OR endotoxaemia OR endotoxaemias OR endotoxaemic OR septicem* OR septicemia[tiab] OR septicemic OR septicaem* OR septicaemia[tiab] OR septicemias[tiab] OR septicaemias[tiab] OR septicaemic OR sepsis[tiab] OR septic OR urosepsis OR uroseptic OR urosepses OR bacteria[tiab] OR bacterial OR bacterium OR bacteria OR anaerobe[tiab] OR anaerobes[tiab] OR OR aerobe[tiab] OR aerobes[tiab]  OR bacill* OR bacillus OR bacilli OR bacillary OR coccus OR cocci OR coccal OR enterobacter* OR enterobacter OR enterococc* OR enterococci OR enterococcus OR enterococcal OR escherichia* OR escherichia OR "e. coli" OR Haemophil* OR staphylococc* OR staphylococcus OR staphylococci OR staphylococcal OR Staphylococcaceae OR staph OR "s. aureus" OR "s. epidermidis" OR strep OR streptococc* OR streptococci OR streptococcus OR streptococcal OR pneumococc* OR Klebsiell* OR Klebsiella OR mycobacter* OR mycobacterial OR mycobacterium OR mycobacteria OR acinetobacter* OR acinetobacter OR Aliivibrio OR vibrio OR Cholera OR salmonell* OR salmonella OR campylobact* OR campylobacter OR Chryseobacter* OR Chryseobacterium OR nocardia* OR moraxell* OR moraxella OR rhodococc* OR rhodococcus OR rhodococcal OR rhodococci OR pseudomona* OR pseudomonas OR pseudomonal OR eubacter* OR eubacteria OR eubacterium OR eubacterial OR edwardsiell* OR edwardsiella OR coxiell* OR coxiella OR tubercul* OR tuberculosis OR tuberculous OR "gram positive" OR "gram negative" OR gram-positive OR gram-negative OR pasturella OR MRSA OR MRSE OR clostridium OR clostridia OR clostridial OR clostrid* OR serratia OR serratia* OR legionella OR legionell* OR listeria OR listeriosis OR listerioses OR Listerios* OR listeria OR listeriosis OR listerioses OR lister* OR francisella* OR Francisella OR Francisellaceae OR bacteroides OR bacteroid* OR citrobacter OR citrobacter* OR tularemia OR tularemias OR tularemic OR tularemi* OR tularaemia OR tularaemias OR tularaemic OR tularaemi* OR proteus OR burkholderia OR burkholderial OR burkholderias OR burkholderia* OR mycoplasma OR mycoplasmas OR MYCOPLASMATACEAE OR mycoplasm* OR beta-lactam* OR beta-lactamase OR TB OR VRE OR VDE OR actinomycetales OR actinomyc* OR actinomycetes OR actinomycete OR Erysipel* OR melioidosis OR melioidoses OR melioidotic OR mycobacter* OR mycobacteriosis OR mycobacterial OR mycobacterioses OR yersinia* OR yersinia OR yersinias OR yersinial OR Cupriavidus OR "s. aureus" OR "s. epidermidis" OR meningococc* OR meningococcal[tiab] OR meningococcemia OR Meningococcaemia OR meningococcemic OR meningococcaemic OR meningococcus OR neisser* OR neisseria OR neisserial OR "Waterhouse-Friderichsen" OR "Waterhouse Friderichsen" OR syphilis OR neurosyphil* OR "Ophthalmia Neonatorum" OR "Fournier Gangrene" OR "fournier's gangrene" OR "fourniers gangrene" OR Anaplasmat* OR Anaplasm* OR Ehrlichio* OR "Heartwater Disease" OR Bartonell* OR "cat-scratch disease" OR "cat-scratch fever" OR "cat scratch disease" OR "cat scratch fever" OR "trench fever" OR bordatell* OR "Whooping Cough" OR borreli* OR "Lyme Disease" OR "Erythema Chronicum Migrans" OR Neuroborreli* OR "Relapsing Fever" OR "relapsing fevers" OR Brucell* OR Burkholderi* OR Glanders OR Melioid* OR chlamydia* OR Lymphogranulom* OR Chlamydophil* OR Psittaco* OR Cytophagac* OR Desulfovibrio* OR Enterobacter* OR "Granuloma Inguinale" OR Rhinosclerom* OR Paratyphoid OR typhoid OR plague OR pseudotubercul* OR Flavobacter* OR Fusobacter* OR "Necrotizing Ulcerative gingivitis" OR "Lemierre Syndrome" OR "Lemierre's Syndrome" OR "Lemierres Syndrome" OR "Rat-Bite Fever" OR "Rat Bite Fever" OR Helicobact* OR "Legionnaires' Disease" OR "legionnaire disease" OR "legionnaires disease" OR Leptospir* OR "Weil Disease" OR "Weil's disease" OR "Weils disease" OR Ureaplasma OR Gonorrhea* OR Waterhouse-Friderichsen OR "Waterhouse Friderichsen" OR Pasteurell* OR Actinobacill* OR chancre* OR Chancroid OR Piscirickettsia* OR "Q Fever" OR Q-fever OR rickettsia* OR "Boutonneuse Fever" OR "Boutonneuse's Fever" OR "Boutonneuses Fever" OR "Rocky Mountain Spotted Fever" OR RMSF OR typhus OR Flea-Borne OR Louse-Borne OR Tick-Borne OR "Hemorrhagic Fever" OR "Haemorrhagic Fever" OR "Hemorrhagic Fevers" OR "Haemorrhagic Fevers" OR "tick fever" OR "swine fever" OR "tick fevers" OR "swine fevers" OR "forest disease" OR "forest diseases" OR Babesiosis OR babesia* OR babesioses OR babesiotic OR Theileriasis OR Theileriases OR Theileriatic OR Treponem* OR Pinta OR Chancre OR Yaws OR "Whipple Disease" OR "Whipple's Disease" OR "Whipples Disease" OR Corynebact* OR Diphther* OR Erythrasma* OR Leprosy OR leprous OR paratubercul* OR Mycet* OR bacilla OR Anthrax OR anthracis OR Bifidobacter* OR Botulism OR tetanus OR tetani OR Furunc* OR Impetig* OR Ecthyma* OR "Rheumatic Fever" OR "Rheumatic Heart Disease" OR "Scarlet Fever" OR std OR stds OR "sexually transmitted" OR "sexually-transmitted" OR Lymphogranuloma OR Venere* OR Psittaco* OR Erythrasma* OR "necrotizing fasciitis" OR "granuloma inguinale" OR "hidradenitis suppurativa" OR carbunc* OR "Erythema Induratum" OR "Lupus Vulgaris" OR Spirochaet* OR "Gas Gangrene")